Rebecca Garner

Publications

Peer-reviewed

  1. Garner RE, Kraemer SA, Onana VE, Fradette M, Varin M-P, Huot Y, Walsh DA. A genome catalogue of lake bacterial diversity and its drivers at continental scale. Nature Microbiology. doi:10.1038/s41564-023-01435-6.
  2. Monchamp M-È, Taranu ZE, Garner RE, Rehill T, Morissette O, Iversen LL, Fugère V, Littlefair JE, Barbosa da Costa N, Desforges JE, Sanchez Schacht JR, Derry AM, Cooke SJ, Barrett RDH, Walsh DA, Ragoussis I, Albert M, Cristescu ME, Gregory-Eaves I. Prioritizing taxa for genetic reference database development to advance inland water conservation. Biological Conservation 2023, 280:109963. doi:10.1016/j.biocon.2023.109963.
  3. Oliva A, Onana VE, Garner RE, Kraemer SA, Fradette M, Walsh DA, Huot Y. Geospatial analysis reveals a hotspot of fecal bacteria in Canadian prairie lakes linked to agricultural non-point sources. Water Research 2023, 231:119596. doi:10.1016/j.watres.2023.119596.
  4. Gros M, Zilkey DR, Griffiths KT, Pham J, MacKeigan PW, Taranu ZE, Aulard C, Baud A, Garner RE, Ghanbari H, Lachapelle M, Monchamp M-È, Paquette C, Antoniades D, Francus P, Smol JP, Gregory-Eaves I. Long-term environmental changes in the Canadian boreal zone: Synthesizing temporal trends from lake sediment archives to inform future sustainability. Environmental Reviews 2023. doi:10.1139/er-2023-0006.
  5. Garner RE, Kraemer SA, Onana VE, Huot Y, Gregory-Eaves I, Walsh DA. Protist Diversity and Metabolic Strategy in Freshwater Lakes Are Shaped by Trophic State and Watershed Land Use on a Continental Scale. mSystems 2022, 7(4):e00316-22. doi:10.1128/msystems.00316-22.
  6. Monchamp M-È, Walsh DA, Garner RE, Kraemer SA, Beisner BE, Cristescu ME, Gregory-Eaves I. Comparative analysis of zooplankton diversity in freshwaters: What can we gain from metagenomic analysis?. Environmental DNA 2022, 4:1250-1264. doi:10.1002/edn3.335.
  7. MacKeigan PW, Garner RE, Monchamp M-È, Walsh DA, Onana VE, Kraemer SA, Pick FR, Beisner BE, Agbeti MD, Barbosa da Costa N, Shapiro BJ, Gregory-Eaves I. Comparing microscopy and DNA metabarcoding techniques for identifying cyanobacteria assemblages across hundreds of lakes. Harmful Algae 2022, 113:102187. doi:10.1016/j.hal.2022.102187.
  8. Oliva A, Garner RE, Walsh D, Huot Y. The occurrence of potentially pathogenic fungi and protists in Canadian lakes predicted using geomatics, in situ and satellite-derived variables: Towards a tele-epidemiological approach. Water Research 2022, 209:117935. doi:10.1016/j.watres.2021.117935.
  9. Capo E, Giguet-Covex C, Rouillard A, Nota K, Heintzman PD, Vuillemin A, Ariztegui D, Arnaud F, Belle S, Bertilsson S, Bigler C, Bindler R, Brown AG, Clarke CL, Crump SE, Debroas D, Englund G, Ficetola GF, Garner RE, Gauthier J, Gregory-Eaves I, Heinecke L, Herzschuh U, Ibrahim A, Kisand V, Kjær KH, Lammers Y, Littlefair J, Messager E, Monchamp M-È, Olajos F, Orsi W, Pedersen MW, Rijal DP, Rydberg J, Spanbauer T, Stoof-Leichsenring KR, Taberlet P, Talas L, Thomas C, Walsh D, Wang Y, Willerslev E, van Woerkom A, Zimmermann HH, Coolen MJL, Epp LS, Domaizon I, Alsos IG, Parducci L. Lake Sedimentary DNA Research on Past Terrestrial and Aquatic Biodiversity: Overview and Recommendations. Quaternary 2021, 4(1):6. doi:10.3390/quat4010006.
  10. Garner RE, Gregory-Eaves I, Walsh DA. Sediment Metagenomes as Time Capsules of Lake Microbiomes. mSphere 2020, 5(6):e00512-20. doi:10.1128/msphere.00512-20.
  11. Selber-Hnatiw S, Sultana T, Tse W, Abdollahi N, Abdullah S, Al Rahbani J, Alazar D, Alrumhein NJ, Aprikian S, Arshad R, Azuelos J-D, Bernadotte D, Beswick N, Chazbey H, Church K, Ciubotaru E, D’Amato L, Del Corpo T, Deng J, Di Giulio BL, Diveeva D, Elahie E, Frank JGM, Furze E, Garner R, Gibbs V, Goldberg-Hall R, Goldman CJ, Goltsios F-F, Gorjipour K, Grant T, Greco B, Guliyev N, Habrich A, Hyland H, Ibrahim N, Iozzo T, Jawaheer-Fenaoui A, Jaworski JJ, Jhajj MK, Jones J, Joyette R, Kaudeer S, Kelley S, Kiani S, Koayes M, Kpata AJA-AL, Maingot S, Martin S, Mathers K, McCullogh S, McNamara K, Mendonca J, Mohammad K, Momtaz SA, Navaratnarajah T, Nguyen-Duong K, Omran M, Ortiz A, Patel A, Paul-Cole K, Plaisir P-A, Porras Marroquin JA, Prevost A, Quach A, Rafal AJ, Ramsarun R, Rhnima S, Rili L, Safir N, Samson E, Sandiford RR, Secondi S, Shahid S, Shahroozi M, Sidibé F, Smith M, Sreng Flores AM, Suarez Ybarra A, Sénéchal R, Taifour T, Tang L, Trapid A, Tremblay Potvin M, Wainberg J, Wang DN, Weissenberg M, White A, Wilkinson G, Williams B, Wilson JR, Zoppi J, Zouboulakis K, Gamberi C. Metabolic networks of the human gut microbiota. Microbiology 2020, 166(2):96–119. doi:10.1099/mic.0.000853.

Other publications